queryProtein (344 aa)
PSG: a new signal peptide prediction method
N-region: length 10; pos.chg 3; neg.chg 0
H-region: length 1; peak value 0.00
PSG score: -4.40
GvH: von Heijne's method for signal seq. recognition
GvH score (threshold: -2.1): -8.05
possible cleavage site: between 37 and 38
>>> Seems to have no N-terminal signal peptide
ALOM: Klein et al's method for TM region allocation
Init position for calculation: 1
Tentative number of TMS(s) for the threshold 0.5: 0
number of TMS(s) .. fixed
PERIPHERAL Likelihood = 5.09 (at 164)
ALOM score: 5.09 (number of TMSs: 0)
MITDISC: discrimination of mitochondrial targeting seq
R content: 1 Hyd Moment(75): 14.08
Hyd Moment(95): 11.96 G content: 2
D/E content: 1 S/T content: 2
Score: -2.64
Gavel: prediction of cleavage sites for mitochondrial preseq
R-2 motif at 14 HRC|CS
NUCDISC: discrimination of nuclear localization signals
pat4: none
pat7: none
bipartite: none
content of basic residues: 10.8%
NLS Score: -0.47
KDEL: ER retention motif in the C-terminus: none
ER Membrane Retention Signals:
XXRR-like motif in the N-terminus: GHRC
none
SKL: peroxisomal targeting signal in the C-terminus: none
PTS2: 2nd peroxisomal targeting signal: none
VAC: possible vacuolar targeting motif: none
RNA-binding motif: none
Actinin-type actin-binding motif:
type 1: none
type 2: none
NMYR: N-myristoylation pattern : none
Farnesylation/Geranylgeranylation motif: none
memYQRL: transport motif from cell surface to Golgi: none
Tyrosines in the tail: none
Dileucine motif in the tail: none
checking 63 PROSITE DNA binding motifs:
Myb DNA-binding domain repeat signature 1 (PS00037): *** found ***
WSPEEDEKL at 16
Myb DNA-binding domain repeat signature 2 (PS00334): *** found ***
WAQIAKHLPGRTDNEVKNYWNSCI at 88
checking 71 PROSITE ribosomal protein motifs: none
checking 33 PROSITE prokaryotic dna binding motifs: none